Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIPK3Q9H422 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HIPK3Q9H422 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 AC004967.1-201ENST00000453589 447 ntBASIC19.85■□□□□ 0.77
HIPK3Q9H422 RNA5SP416-201ENST00000516838 111 ntBASIC19.85■□□□□ 0.77
HIPK3Q9H422 AC105339.3-201ENST00000560043 636 ntBASIC19.85■□□□□ 0.77
HIPK3Q9H422 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 AC027796.2-201ENST00000575326 344 ntBASIC19.85■□□□□ 0.77
HIPK3Q9H422 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.85■□□□□ 0.77
HIPK3Q9H422 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HIPK3Q9H422 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.84■□□□□ 0.77
HIPK3Q9H422 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.84■□□□□ 0.77
HIPK3Q9H422 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
HIPK3Q9H422 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.84■□□□□ 0.77
HIPK3Q9H422 MTDHP4-201ENST00000600287 670 ntBASIC19.84■□□□□ 0.77
HIPK3Q9H422 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.84■□□□□ 0.77
HIPK3Q9H422 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.84■□□□□ 0.77
HIPK3Q9H422 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HIPK3Q9H422 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HIPK3Q9H422 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIPK3Q9H422 AL158211.5-201ENST00000623583 2518 ntBASIC19.83■□□□□ 0.77
HIPK3Q9H422 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIPK3Q9H422 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIPK3Q9H422 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIPK3Q9H422 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIPK3Q9H422 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HIPK3Q9H422 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 UNC93B6-202ENST00000528242 690 ntBASIC19.83■□□□□ 0.77
HIPK3Q9H422 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 NKAPP1-205ENST00000585790 367 ntBASIC19.83■□□□□ 0.77
HIPK3Q9H422 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.83■□□□□ 0.77
HIPK3Q9H422 AC107918.4-202ENST00000641623 219 ntBASIC19.83■□□□□ 0.77
HIPK3Q9H422 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIPK3Q9H422 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.83■□□□□ 0.76
HIPK3Q9H422 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HIPK3Q9H422 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HIPK3Q9H422 AL032819.2-201ENST00000624543 2162 ntBASIC19.83■□□□□ 0.76
HIPK3Q9H422 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.83■□□□□ 0.76
HIPK3Q9H422 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 AP002414.3-201ENST00000589352 1468 ntBASIC19.82■□□□□ 0.76
HIPK3Q9H422 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HIPK3Q9H422 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.82■□□□□ 0.76
HIPK3Q9H422 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms