Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 AC126763.1-201ENST00000552015 2118 ntBASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 AC091076.1-201ENST00000610741 619 ntBASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 AC090340.1-201ENST00000620778 4980 ntBASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 TNRC18P3-201ENST00000441896 2691 ntBASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
KDM4CQ9H3R0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 AL031133.1-201ENST00000406807 723 ntBASIC19■□□□□ 0.63
KDM4CQ9H3R0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 AC244517.3-201ENST00000616254 1235 ntBASIC19■□□□□ 0.63
KDM4CQ9H3R0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
KDM4CQ9H3R0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19■□□□□ 0.63
KDM4CQ9H3R0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.99■□□□□ 0.63
KDM4CQ9H3R0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms