Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
UBQLN3Q9H347 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBQLN3Q9H347 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBQLN3Q9H347 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 AL357033.4-201ENST00000617703 1807 ntBASIC16.89■□□□□ 0.29
UBQLN3Q9H347 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 AC112777.1-201ENST00000540175 1423 ntBASIC16.89■□□□□ 0.29
UBQLN3Q9H347 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 KRT18P23-201ENST00000435622 1283 ntBASIC16.89■□□□□ 0.29
UBQLN3Q9H347 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 AC104390.1-201ENST00000555663 520 ntBASIC16.89■□□□□ 0.29
UBQLN3Q9H347 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
UBQLN3Q9H347 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 AC083849.1-201ENST00000615227 514 ntBASIC16.88■□□□□ 0.29
UBQLN3Q9H347 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 AC067852.2-201ENST00000590513 2313 ntBASIC16.88■□□□□ 0.29
UBQLN3Q9H347 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 AC135776.1-201ENST00000319817 2481 ntBASIC16.88■□□□□ 0.29
UBQLN3Q9H347 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBQLN3Q9H347 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 AC090340.1-201ENST00000620778 4980 ntBASIC16.87■□□□□ 0.29
UBQLN3Q9H347 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 HCG11-201ENST00000411553 5696 ntBASIC16.87■□□□□ 0.29
UBQLN3Q9H347 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 FAM86EP-206ENST00000510506 987 ntBASIC16.87■□□□□ 0.29
UBQLN3Q9H347 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 MIR3917-201ENST00000580971 93 ntBASIC16.87■□□□□ 0.29
UBQLN3Q9H347 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBQLN3Q9H347 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms