Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRIM2Q9C040 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM2Q9C040 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 AC138028.4-201ENST00000564984 1845 ntBASIC16.78■□□□□ 0.28
TRIM2Q9C040 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.78■□□□□ 0.28
TRIM2Q9C040 SLC25A6P5-201ENST00000435663 894 ntBASIC16.78■□□□□ 0.28
TRIM2Q9C040 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 AC005363.2-201ENST00000618631 242 ntBASIC16.78■□□□□ 0.28
TRIM2Q9C040 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM2Q9C040 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM2Q9C040 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 KRT18P22-201ENST00000402024 1347 ntBASIC16.77■□□□□ 0.28
TRIM2Q9C040 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 TMPOP1-202ENST00000424642 1267 ntBASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 AC104390.1-201ENST00000555663 520 ntBASIC16.77■□□□□ 0.28
TRIM2Q9C040 AL512604.3-201ENST00000569583 964 ntBASIC16.77■□□□□ 0.28
TRIM2Q9C040 RN7SL850P-201ENST00000579959 291 ntBASIC16.77■□□□□ 0.28
TRIM2Q9C040 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 REXO1L9P-201ENST00000604264 2108 ntBASIC16.77■□□□□ 0.28
TRIM2Q9C040 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.77■□□□□ 0.28
TRIM2Q9C040 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRIM2Q9C040 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM2Q9C040 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM2Q9C040 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM2Q9C040 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM2Q9C040 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM2Q9C040 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM2Q9C040 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRIM2Q9C040 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM2Q9C040 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 FLJ13224-201ENST00000313737 1514 ntBASIC16.76■□□□□ 0.27
TRIM2Q9C040 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM2Q9C040 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM2Q9C040 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms