Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 AC105339.3-201ENST00000560043 636 ntBASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 AL691403.2-201ENST00000618460 490 ntBASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH11XQ9BZA7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 UPF3AP3-201ENST00000420996 769 ntBASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 LAGE3P1-201ENST00000425356 484 ntBASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 AC007967.3-201ENST00000434308 558 ntBASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 KRT18P3-201ENST00000451602 1288 ntBASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH11XQ9BZA7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 AP002414.3-201ENST00000589352 1468 ntBASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 GPX1P2-201ENST00000429271 606 ntBASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 AC010327.4-202ENST00000591484 748 ntBASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 AC055717.3-201ENST00000622967 595 ntBASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH11XQ9BZA7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 UNC93B6-202ENST00000528242 690 ntBASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH11XQ9BZA7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 RPSAP43-201ENST00000402237 625 ntBASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 AC040169.1-201ENST00000565382 521 ntBASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH11XQ9BZA7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.5■■□□□ 1.35
PCDH11XQ9BZA7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms