Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDNQ99608 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
NDNQ99608 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.28■□□□□ 0.52
NDNQ99608 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDNQ99608 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.28■□□□□ 0.52
NDNQ99608 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDNQ99608 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
NDNQ99608 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDNQ99608 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NDNQ99608 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.28■□□□□ 0.52
NDNQ99608 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NDNQ99608 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
NDNQ99608 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.27■□□□□ 0.52
NDNQ99608 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 SDHAP2-201ENST00000455183 2001 ntBASIC18.27■□□□□ 0.52
NDNQ99608 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
NDNQ99608 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.27■□□□□ 0.52
NDNQ99608 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.27■□□□□ 0.52
NDNQ99608 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.27■□□□□ 0.52
NDNQ99608 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.27■□□□□ 0.52
NDNQ99608 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NDNQ99608 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NDNQ99608 AL163051.1-201ENST00000569214 1512 ntBASIC18.27■□□□□ 0.51
NDNQ99608 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.27■□□□□ 0.51
NDNQ99608 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NDNQ99608 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NDNQ99608 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.26■□□□□ 0.51
NDNQ99608 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 GMCL1P1-201ENST00000463439 1581 ntBASIC18.26■□□□□ 0.51
NDNQ99608 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
NDNQ99608 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NDNQ99608 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 WWOX-216ENST00000569818 525 ntBASIC18.26■□□□□ 0.51
NDNQ99608 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
NDNQ99608 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.26■□□□□ 0.51
NDNQ99608 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.26■□□□□ 0.51
NDNQ99608 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.26■□□□□ 0.51
NDNQ99608 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.26■□□□□ 0.51
NDNQ99608 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 BCL2-203ENST00000589955 5011 ntBASIC18.26■□□□□ 0.51
NDNQ99608 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NDNQ99608 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.25■□□□□ 0.51
NDNQ99608 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.25■□□□□ 0.51
NDNQ99608 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NDNQ99608 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 HOXB1-202ENST00000577092 1414 ntBASIC18.25■□□□□ 0.51
NDNQ99608 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.25■□□□□ 0.51
NDNQ99608 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 TSPY14P-201ENST00000303979 915 ntBASIC18.25■□□□□ 0.51
NDNQ99608 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
NDNQ99608 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDNQ99608 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.25■□□□□ 0.51
NDNQ99608 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.25■□□□□ 0.51
NDNQ99608 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms