Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 DUX4L17-201ENST00000557360 1267 ntBASIC18.39■□□□□ 0.53
PHOX2BQ99453 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 BX323043.1-201ENST00000641006 1765 ntBASIC18.39■□□□□ 0.53
PHOX2BQ99453 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PHOX2BQ99453 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 AL353692.3-201ENST00000407031 1396 ntBASIC18.39■□□□□ 0.53
PHOX2BQ99453 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PHOX2BQ99453 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 AC015922.1-201ENST00000421102 1152 ntBASIC18.38■□□□□ 0.53
PHOX2BQ99453 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 AP002414.3-201ENST00000589352 1468 ntBASIC18.38■□□□□ 0.53
PHOX2BQ99453 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.38■□□□□ 0.53
PHOX2BQ99453 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PHOX2BQ99453 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 AC245100.3-201ENST00000441281 285 ntBASIC18.37■□□□□ 0.53
PHOX2BQ99453 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 AC190387.1-201ENST00000551683 408 ntBASIC18.37■□□□□ 0.53
PHOX2BQ99453 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 MIR4745-201ENST00000577608 62 ntBASIC18.37■□□□□ 0.53
PHOX2BQ99453 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.37■□□□□ 0.53
PHOX2BQ99453 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PHOX2BQ99453 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms