Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 AC121338.2-201ENST00000622535 1744 ntBASIC8.83□□□□□ -1
PRAC1Q96KF2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC8.83□□□□□ -1
PRAC1Q96KF2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 AC106886.4-201ENST00000623557 2502 ntBASIC8.83□□□□□ -1
PRAC1Q96KF2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC8.83□□□□□ -1
PRAC1Q96KF2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC8.83□□□□□ -1
PRAC1Q96KF2 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
PRAC1Q96KF2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC8.83□□□□□ -1
PRAC1Q96KF2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 MYO15B-237ENST00000642007 4893 ntBASIC8.82□□□□□ -1
PRAC1Q96KF2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC8.82□□□□□ -1
PRAC1Q96KF2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC8.82□□□□□ -1
PRAC1Q96KF2 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
PRAC1Q96KF2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 AGGF1P2-201ENST00000426656 2106 ntBASIC8.82□□□□□ -1
PRAC1Q96KF2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC8.82□□□□□ -1
PRAC1Q96KF2 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 DNM1P41-201ENST00000623634 3350 ntBASIC8.82□□□□□ -1
PRAC1Q96KF2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
PRAC1Q96KF2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC8.82□□□□□ -1
PRAC1Q96KF2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 AC005562.1-201ENST00000583030 3219 ntBASIC8.82□□□□□ -1
PRAC1Q96KF2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
PRAC1Q96KF2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
PRAC1Q96KF2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms