Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TIMD4Q96H15 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.31■□□□□ 0.04
TIMD4Q96H15 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 LINC00265-3P-201ENST00000447588 903 ntBASIC15.3■□□□□ 0.04
TIMD4Q96H15 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 CLEC4GP1-201ENST00000596555 870 ntBASIC15.3■□□□□ 0.04
TIMD4Q96H15 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.3■□□□□ 0.04
TIMD4Q96H15 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 AL691432.3-201ENST00000621860 400 ntBASIC15.3■□□□□ 0.04
TIMD4Q96H15 NFIC-211ENST00000641145 8399 ntBASIC15.3■□□□□ 0.04
TIMD4Q96H15 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.3■□□□□ 0.04
TIMD4Q96H15 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TIMD4Q96H15 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 DRAXINP1-201ENST00000437611 948 ntBASIC15.29■□□□□ 0.04
TIMD4Q96H15 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 AC113404.2-201ENST00000507884 177 ntBASIC15.29■□□□□ 0.04
TIMD4Q96H15 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.29■□□□□ 0.04
TIMD4Q96H15 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TIMD4Q96H15 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 KRT126P-201ENST00000549467 1181 ntBASIC15.28■□□□□ 0.04
TIMD4Q96H15 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 Z69720.1-201ENST00000601483 472 ntBASIC15.28■□□□□ 0.04
TIMD4Q96H15 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.28■□□□□ 0.04
TIMD4Q96H15 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.28■□□□□ 0.04
TIMD4Q96H15 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TIMD4Q96H15 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms