Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.21■□□□□ 0.35
TM9SF4Q92544 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.21■□□□□ 0.35
TM9SF4Q92544 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TM9SF4Q92544 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.21■□□□□ 0.35
TM9SF4Q92544 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.21■□□□□ 0.35
TM9SF4Q92544 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.21■□□□□ 0.35
TM9SF4Q92544 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.21■□□□□ 0.35
TM9SF4Q92544 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TM9SF4Q92544 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF4Q92544 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.21■□□□□ 0.34
TM9SF4Q92544 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF4Q92544 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
TM9SF4Q92544 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF4Q92544 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.21■□□□□ 0.34
TM9SF4Q92544 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TM9SF4Q92544 BCL2-203ENST00000589955 5011 ntBASIC17.21■□□□□ 0.34
TM9SF4Q92544 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
TM9SF4Q92544 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 NOC2LP2-201ENST00000407594 1944 ntBASIC17.2■□□□□ 0.34
TM9SF4Q92544 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 SEC1P-202ENST00000473944 940 ntBASIC17.2■□□□□ 0.34
TM9SF4Q92544 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 MIR3917-201ENST00000580971 93 ntBASIC17.2■□□□□ 0.34
TM9SF4Q92544 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 AL136038.4-201ENST00000603606 1261 ntBASIC17.2■□□□□ 0.34
TM9SF4Q92544 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.2■□□□□ 0.34
TM9SF4Q92544 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TM9SF4Q92544 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 AL162741.1-201ENST00000565563 1558 ntBASIC17.19■□□□□ 0.34
TM9SF4Q92544 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 AC004870.1-201ENST00000315132 882 ntBASIC17.19■□□□□ 0.34
TM9SF4Q92544 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 AC068880.1-201ENST00000507289 2297 ntBASIC17.19■□□□□ 0.34
TM9SF4Q92544 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.19■□□□□ 0.34
TM9SF4Q92544 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TM9SF4Q92544 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms