Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 AC004980.1-204ENST00000429707 299 ntBASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 AC133561.5-201ENST00000635547 218 ntBASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 REXO1L9P-201ENST00000604264 2108 ntBASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAB40AQ8WXH6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 MIR6786-201ENST00000616843 113 ntBASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 AL645608.8-201ENST00000606034 2086 ntBASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB40AQ8WXH6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 AC008556.1-201ENST00000610908 2040 ntBASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 AP000525.1-201ENST00000608286 694 ntBASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.02■□□□□ 0.16
RAB40AQ8WXH6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 KRT8P32-201ENST00000512863 1461 ntBASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAB40AQ8WXH6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.01■□□□□ 0.15
RAB40AQ8WXH6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms