Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC44A1Q8WWI5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.27■□□□□ 0.51
SLC44A1Q8WWI5 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC44A1Q8WWI5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.27■□□□□ 0.51
SLC44A1Q8WWI5 AC080080.1-201ENST00000625121 2420 ntBASIC18.27■□□□□ 0.51
SLC44A1Q8WWI5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 KRT18P23-201ENST00000435622 1283 ntBASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC44A1Q8WWI5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 AL024508.2-201ENST00000607749 1894 ntBASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 ITM2C-210ENST00000620962 501 ntBASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 FAM197Y4-202ENST00000622692 608 ntBASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC44A1Q8WWI5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 PCDHA12-202ENST00000613593 2588 ntBASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 HCG11-201ENST00000411553 5696 ntBASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 KRT18P29-201ENST00000397031 1267 ntBASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SLC44A1Q8WWI5 AC138932.1-201ENST00000534164 6830 ntBASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
SLC44A1Q8WWI5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms