Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 AC004461.1-201ENST00000412461 403 ntBASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 KRT8P50-201ENST00000562022 1438 ntBASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRUNE2Q8WUY3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 DUX4L27-201ENST00000554796 1261 ntBASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 TERF1P3-201ENST00000505638 1227 ntBASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRUNE2Q8WUY3 AC079776.2-201ENST00000641154 1609 ntBASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 ARSEP1-201ENST00000420443 635 ntBASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 AC025048.6-201ENST00000634326 1161 ntBASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRUNE2Q8WUY3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PRUNE2Q8WUY3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms