Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01555Q8NAE3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 CHCHD2P8-201ENST00000429873 447 ntBASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 NPAP1P7-201ENST00000613027 823 ntBASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 AC093458.2-201ENST00000623150 629 ntBASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01555Q8NAE3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 RN7SL606P-201ENST00000472779 293 ntBASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 AL354751.1-201ENST00000412768 1863 ntBASIC17.48■□□□□ 0.39
LINC01555Q8NAE3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01555Q8NAE3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms