Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 PHGDH-209ENST00000641074 1780 ntBASIC25.11■■□□□ 1.61
ARHGEF28Q8N1W1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 AC008735.5-201ENST00000623544 497 ntBASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ARHGEF28Q8N1W1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 PGAM5P1-201ENST00000518923 814 ntBASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 OR7E14P-202ENST00000530490 1290 ntBASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 AC034105.1-201ENST00000563488 319 ntBASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF28Q8N1W1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
ARHGEF28Q8N1W1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC25.08■■□□□ 1.6
ARHGEF28Q8N1W1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
ARHGEF28Q8N1W1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.6
ARHGEF28Q8N1W1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
ARHGEF28Q8N1W1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC25.08■■□□□ 1.6
ARHGEF28Q8N1W1 AL356309.3-201ENST00000624132 1934 ntBASIC25.08■■□□□ 1.6
ARHGEF28Q8N1W1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC25.07■■□□□ 1.6
ARHGEF28Q8N1W1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 POLD2P1-201ENST00000511220 997 ntBASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 MTDHP4-201ENST00000600287 670 ntBASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF28Q8N1W1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms