Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 AL596275.1-201ENST00000423464 877 ntBASIC16.86■□□□□ 0.29
VRK2Q86Y07 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.86■□□□□ 0.29
VRK2Q86Y07 AC009947.2-201ENST00000444014 672 ntBASIC16.86■□□□□ 0.29
VRK2Q86Y07 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 AC010240.3-201ENST00000607688 395 ntBASIC16.86■□□□□ 0.29
VRK2Q86Y07 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
VRK2Q86Y07 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VRK2Q86Y07 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 AL024508.2-201ENST00000607749 1894 ntBASIC16.85■□□□□ 0.29
VRK2Q86Y07 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 AC009065.1-201ENST00000564055 1225 ntBASIC16.85■□□□□ 0.29
VRK2Q86Y07 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 AC024243.1-201ENST00000609234 778 ntBASIC16.85■□□□□ 0.29
VRK2Q86Y07 FAM87A-204ENST00000613235 858 ntBASIC16.85■□□□□ 0.29
VRK2Q86Y07 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 FZD10-202ENST00000539839 3282 ntBASIC16.85■□□□□ 0.29
VRK2Q86Y07 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.85■□□□□ 0.29
VRK2Q86Y07 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VRK2Q86Y07 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 SLC25A6P5-201ENST00000435663 894 ntBASIC16.84■□□□□ 0.29
VRK2Q86Y07 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 SEC1P-202ENST00000473944 940 ntBASIC16.84■□□□□ 0.29
VRK2Q86Y07 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 AC093827.2-201ENST00000512654 315 ntBASIC16.84■□□□□ 0.29
VRK2Q86Y07 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
VRK2Q86Y07 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VRK2Q86Y07 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms