Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 AC139887.3-201ENST00000568585 713 ntBASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 AC064862.7-201ENST00000604520 867 ntBASIC15.49■□□□□ 0.07
RAI1Q7Z5J4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 PKD1P6-201ENST00000343738 4769 ntBASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 AC112777.1-201ENST00000540175 1423 ntBASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 SCARNA2-201ENST00000458748 420 ntBASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 AL355877.3-201ENST00000622820 899 ntBASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RAI1Q7Z5J4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 AL591684.3-201ENST00000605187 298 ntBASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 HNRNPDP1-201ENST00000439535 754 ntBASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RAI1Q7Z5J4 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 INTS4P1-201ENST00000438455 1935 ntBASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 SDHAP2-201ENST00000455183 2001 ntBASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RAI1Q7Z5J4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms