Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 TEX21P-204ENST00000641479 1693 ntBASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM53Q6P2H8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 AC091390.4-202ENST00000476426 537 ntBASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM53Q6P2H8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM53Q6P2H8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TMEM53Q6P2H8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.71■□□□□ 0.26
TMEM53Q6P2H8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM53Q6P2H8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM53Q6P2H8 KRT17P2-201ENST00000300992 1314 ntBASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 ESPNP-201ENST00000270691 2015 ntBASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 AC022211.2-201ENST00000585075 2527 ntBASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 B3GAT3P1-201ENST00000471720 806 ntBASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 AC093827.2-201ENST00000512654 315 ntBASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM53Q6P2H8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 TSPY7P-201ENST00000431358 1114 ntBASIC16.69■□□□□ 0.26
TMEM53Q6P2H8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms