Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 FAM210CP-201ENST00000445714 574 ntBASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 AC024563.2-201ENST00000603282 481 ntBASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 AP000997.3-201ENST00000623333 2250 ntBASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 LINC00167-201ENST00000530583 1419 ntBASIC19.17■□□□□ 0.66
PTPN20Q4JDL3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 SPDYE13P-201ENST00000445314 798 ntBASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 VENTXP5-201ENST00000523979 775 ntBASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 AC083849.1-201ENST00000615227 514 ntBASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 AL133373.2-201ENST00000623187 2828 ntBASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.16■□□□□ 0.66
PTPN20Q4JDL3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 FLJ13224-201ENST00000313737 1514 ntBASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PTPN20Q4JDL3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
PTPN20Q4JDL3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
PTPN20Q4JDL3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PTPN20Q4JDL3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms