Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RFX4Q33E94 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX4Q33E94 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.97■□□□□ 0.31
RFX4Q33E94 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX4Q33E94 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX4Q33E94 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX4Q33E94 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RFX4Q33E94 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX4Q33E94 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX4Q33E94 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX4Q33E94 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX4Q33E94 GMCL1P1-201ENST00000463439 1581 ntBASIC16.97■□□□□ 0.31
RFX4Q33E94 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX4Q33E94 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX4Q33E94 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RFX4Q33E94 AC133681.1-201ENST00000465482 601 ntBASIC16.96■□□□□ 0.31
RFX4Q33E94 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 PRSS44-201ENST00000515154 1146 ntBASIC16.96■□□□□ 0.31
RFX4Q33E94 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX4Q33E94 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX4Q33E94 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 AC124016.1-201ENST00000609552 612 ntBASIC16.96■□□□□ 0.31
RFX4Q33E94 AC110285.5-201ENST00000611501 352 ntBASIC16.96■□□□□ 0.31
RFX4Q33E94 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RFX4Q33E94 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX4Q33E94 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX4Q33E94 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.96■□□□□ 0.3
RFX4Q33E94 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.96■□□□□ 0.3
RFX4Q33E94 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX4Q33E94 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
RFX4Q33E94 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX4Q33E94 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
RFX4Q33E94 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX4Q33E94 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX4Q33E94 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX4Q33E94 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.96■□□□□ 0.3
RFX4Q33E94 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RFX4Q33E94 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX4Q33E94 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX4Q33E94 AC004980.1-204ENST00000429707 299 ntBASIC16.95■□□□□ 0.3
RFX4Q33E94 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.95■□□□□ 0.3
RFX4Q33E94 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RFX4Q33E94 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX4Q33E94 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX4Q33E94 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX4Q33E94 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 AL121761.2-201ENST00000598007 1648 ntBASIC16.95■□□□□ 0.3
RFX4Q33E94 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFX4Q33E94 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX4Q33E94 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX4Q33E94 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX4Q33E94 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX4Q33E94 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.94■□□□□ 0.3
RFX4Q33E94 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RFX4Q33E94 AP000593.1-201ENST00000393668 712 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms