Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA1P56159 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA1P56159 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA1P56159 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.29■□□□□ 0.2
GFRA1P56159 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA1P56159 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA1P56159 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA1P56159 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.28■□□□□ 0.2
GFRA1P56159 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 AC132938.6-201ENST00000623828 1655 ntBASIC16.28■□□□□ 0.2
GFRA1P56159 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA1P56159 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
GFRA1P56159 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.28■□□□□ 0.2
GFRA1P56159 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.28■□□□□ 0.2
GFRA1P56159 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 KRT126P-201ENST00000549467 1181 ntBASIC16.28■□□□□ 0.2
GFRA1P56159 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.28■□□□□ 0.2
GFRA1P56159 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 AP005901.3-202ENST00000581653 237 ntBASIC16.28■□□□□ 0.2
GFRA1P56159 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA1P56159 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 AC012313.10-201ENST00000623509 926 ntBASIC16.28■□□□□ 0.2
GFRA1P56159 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA1P56159 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GFRA1P56159 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA1P56159 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA1P56159 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA1P56159 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.27■□□□□ 0.2
GFRA1P56159 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GFRA1P56159 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.27■□□□□ 0.2
GFRA1P56159 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 AC093010.1-201ENST00000473625 1624 ntBASIC16.27■□□□□ 0.2
GFRA1P56159 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.27■□□□□ 0.2
GFRA1P56159 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GFRA1P56159 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
GFRA1P56159 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
GFRA1P56159 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.27■□□□□ 0.2
GFRA1P56159 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 IGHV3-47-201ENST00000425060 335 ntBASIC16.27■□□□□ 0.2
GFRA1P56159 KRT17P6-201ENST00000453795 1220 ntBASIC16.27■□□□□ 0.2
GFRA1P56159 VENTXP7-201ENST00000475503 772 ntBASIC16.27■□□□□ 0.2
GFRA1P56159 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GFRA1P56159 AC091607.1-201ENST00000490318 1060 ntBASIC16.27■□□□□ 0.2
GFRA1P56159 AC104819.1-201ENST00000504587 486 ntBASIC16.27■□□□□ 0.2
GFRA1P56159 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA1P56159 PRELID1P1-202ENST00000567272 903 ntBASIC16.27■□□□□ 0.2
GFRA1P56159 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.27■□□□□ 0.2
GFRA1P56159 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.27■□□□□ 0.2
GFRA1P56159 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
GFRA1P56159 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.27■□□□□ 0.19
GFRA1P56159 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GFRA1P56159 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GFRA1P56159 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GFRA1P56159 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
GFRA1P56159 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GFRA1P56159 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.26■□□□□ 0.19
GFRA1P56159 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
GFRA1P56159 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GFRA1P56159 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.26■□□□□ 0.19
GFRA1P56159 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GFRA1P56159 MTCL1P1-201ENST00000446207 792 ntBASIC16.26■□□□□ 0.19
GFRA1P56159 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.26■□□□□ 0.19
GFRA1P56159 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.26■□□□□ 0.19
GFRA1P56159 AC074051.2-201ENST00000565115 352 ntBASIC16.26■□□□□ 0.19
GFRA1P56159 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.26■□□□□ 0.19
GFRA1P56159 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms