Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH13P55290 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH13P55290 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH13P55290 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 HOXB1-202ENST00000577092 1414 ntBASIC17.84■□□□□ 0.45
CDH13P55290 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH13P55290 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDH13P55290 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 MIR149-201ENST00000384879 89 ntBASIC17.84■□□□□ 0.45
CDH13P55290 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH13P55290 SLC25A1P2-201ENST00000430693 912 ntBASIC17.84■□□□□ 0.45
CDH13P55290 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.84■□□□□ 0.45
CDH13P55290 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDH13P55290 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH13P55290 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
CDH13P55290 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CDH13P55290 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH13P55290 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDH13P55290 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH13P55290 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH13P55290 AC012317.2-201ENST00000623305 2251 ntBASIC17.83■□□□□ 0.45
CDH13P55290 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH13P55290 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDH13P55290 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.83■□□□□ 0.45
CDH13P55290 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.83■□□□□ 0.45
CDH13P55290 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 TSPY17P-201ENST00000450329 467 ntBASIC17.83■□□□□ 0.44
CDH13P55290 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH13P55290 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH13P55290 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDH13P55290 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH13P55290 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDH13P55290 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
CDH13P55290 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CDH13P55290 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH13P55290 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 LINC01126-201ENST00000623515 1646 ntBASIC17.83■□□□□ 0.44
CDH13P55290 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH13P55290 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH13P55290 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 AC092338.2-201ENST00000568827 1415 ntBASIC17.82■□□□□ 0.44
CDH13P55290 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH13P55290 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH13P55290 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH13P55290 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH13P55290 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
CDH13P55290 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH13P55290 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH13P55290 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH13P55290 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CDH13P55290 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH13P55290 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH13P55290 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDH13P55290 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH13P55290 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH13P55290 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CDH13P55290 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
CDH13P55290 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDH13P55290 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDH13P55290 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms