Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19■□□□□ 0.63
EPHB3P54753 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB3P54753 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19■□□□□ 0.63
EPHB3P54753 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19■□□□□ 0.63
EPHB3P54753 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB3P54753 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19■□□□□ 0.63
EPHB3P54753 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19■□□□□ 0.63
EPHB3P54753 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EPHB3P54753 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19■□□□□ 0.63
EPHB3P54753 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19■□□□□ 0.63
EPHB3P54753 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB3P54753 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB3P54753 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB3P54753 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB3P54753 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB3P54753 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB3P54753 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB3P54753 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB3P54753 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB3P54753 TP73-AS1-210ENST00000637775 1455 ntBASIC18.99■□□□□ 0.63
EPHB3P54753 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB3P54753 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB3P54753 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
EPHB3P54753 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB3P54753 AC009533.2-201ENST00000543664 586 ntBASIC18.99■□□□□ 0.63
EPHB3P54753 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.99■□□□□ 0.63
EPHB3P54753 SLC25A6P4-201ENST00000586535 553 ntBASIC18.99■□□□□ 0.63
EPHB3P54753 AC064862.7-201ENST00000604520 867 ntBASIC18.99■□□□□ 0.63
EPHB3P54753 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.99■□□□□ 0.63
EPHB3P54753 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EPHB3P54753 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
EPHB3P54753 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
EPHB3P54753 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
EPHB3P54753 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
EPHB3P54753 GMCL1P1-201ENST00000463439 1581 ntBASIC18.98■□□□□ 0.63
EPHB3P54753 AC005082.1-201ENST00000413042 2259 ntBASIC18.98■□□□□ 0.63
EPHB3P54753 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.98■□□□□ 0.63
EPHB3P54753 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.98■□□□□ 0.63
EPHB3P54753 RCN1P2-201ENST00000398357 915 ntBASIC18.98■□□□□ 0.63
EPHB3P54753 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.98■□□□□ 0.63
EPHB3P54753 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.98■□□□□ 0.63
EPHB3P54753 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.98■□□□□ 0.63
EPHB3P54753 AC079776.4-201ENST00000511039 504 ntBASIC18.98■□□□□ 0.63
EPHB3P54753 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.98■□□□□ 0.63
EPHB3P54753 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.98■□□□□ 0.63
EPHB3P54753 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.98■□□□□ 0.63
EPHB3P54753 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.98■□□□□ 0.63
EPHB3P54753 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.98■□□□□ 0.63
EPHB3P54753 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.98■□□□□ 0.63
EPHB3P54753 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.98■□□□□ 0.63
EPHB3P54753 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
EPHB3P54753 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.98■□□□□ 0.63
EPHB3P54753 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
EPHB3P54753 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
EPHB3P54753 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
EPHB3P54753 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.97■□□□□ 0.63
EPHB3P54753 MRPL3P1-201ENST00000400109 1033 ntBASIC18.97■□□□□ 0.63
EPHB3P54753 AC132008.2-207ENST00000454517 770 ntBASIC18.97■□□□□ 0.63
EPHB3P54753 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.97■□□□□ 0.63
EPHB3P54753 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.97■□□□□ 0.63
EPHB3P54753 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.97■□□□□ 0.63
EPHB3P54753 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.97■□□□□ 0.63
EPHB3P54753 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
EPHB3P54753 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.97■□□□□ 0.63
EPHB3P54753 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EPHB3P54753 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms