Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.35■□□□□ 0.69
PSEN1P49768 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.35■□□□□ 0.69
PSEN1P49768 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PSEN1P49768 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PSEN1P49768 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
PSEN1P49768 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PSEN1P49768 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PSEN1P49768 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.34■□□□□ 0.69
PSEN1P49768 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.34■□□□□ 0.69
PSEN1P49768 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.34■□□□□ 0.69
PSEN1P49768 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PSEN1P49768 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PSEN1P49768 HLA-F-220ENST00000434407 884 ntBASIC19.34■□□□□ 0.69
PSEN1P49768 PVRIG2P-201ENST00000435460 978 ntBASIC19.34■□□□□ 0.69
PSEN1P49768 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.34■□□□□ 0.69
PSEN1P49768 AP000550.4-202ENST00000639755 178 ntBASIC19.34■□□□□ 0.69
PSEN1P49768 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.34■□□□□ 0.69
PSEN1P49768 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PSEN1P49768 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.33■□□□□ 0.69
PSEN1P49768 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSEN1P49768 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSEN1P49768 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSEN1P49768 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSEN1P49768 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PSEN1P49768 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PSEN1P49768 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PSEN1P49768 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PSEN1P49768 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 PCED1CP-201ENST00000419887 785 ntBASIC19.33■□□□□ 0.68
PSEN1P49768 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.33■□□□□ 0.68
PSEN1P49768 AC092597.1-201ENST00000487352 616 ntBASIC19.33■□□□□ 0.68
PSEN1P49768 VENTXP5-201ENST00000523979 775 ntBASIC19.33■□□□□ 0.68
PSEN1P49768 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.33■□□□□ 0.68
PSEN1P49768 ADAM3B-201ENST00000569937 840 ntBASIC19.33■□□□□ 0.68
PSEN1P49768 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.33■□□□□ 0.68
PSEN1P49768 AL136038.4-201ENST00000603606 1261 ntBASIC19.33■□□□□ 0.68
PSEN1P49768 AL358472.4-201ENST00000633140 710 ntBASIC19.33■□□□□ 0.68
PSEN1P49768 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.33■□□□□ 0.68
PSEN1P49768 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.33■□□□□ 0.68
PSEN1P49768 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.33■□□□□ 0.68
PSEN1P49768 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.33■□□□□ 0.68
PSEN1P49768 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PSEN1P49768 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.33■□□□□ 0.68
PSEN1P49768 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PSEN1P49768 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSEN1P49768 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.32■□□□□ 0.68
PSEN1P49768 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.32■□□□□ 0.68
PSEN1P49768 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 AC018470.1-201ENST00000624790 3129 ntBASIC19.32■□□□□ 0.68
PSEN1P49768 AC005332.1-201ENST00000577698 1310 ntBASIC19.32■□□□□ 0.68
PSEN1P49768 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 AL391807.1-203ENST00000604392 2365 ntBASIC19.32■□□□□ 0.68
PSEN1P49768 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PSEN1P49768 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 HCG24-202ENST00000414398 717 ntTSL 3 BASIC19.32■□□□□ 0.68
PSEN1P49768 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.32■□□□□ 0.68
PSEN1P49768 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 AP000240.1-201ENST00000609910 452 ntBASIC19.32■□□□□ 0.68
PSEN1P49768 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.32■□□□□ 0.68
PSEN1P49768 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PSEN1P49768 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.32■□□□□ 0.68
PSEN1P49768 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.32■□□□□ 0.68
PSEN1P49768 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSEN1P49768 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms