Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDC34P49427 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
CDC34P49427 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDC34P49427 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
CDC34P49427 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDC34P49427 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.41□□□□□ -0.1
CDC34P49427 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.41□□□□□ -0.1
CDC34P49427 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC34P49427 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.41□□□□□ -0.1
CDC34P49427 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CDC34P49427 GMCL1P1-201ENST00000463439 1581 ntBASIC14.41□□□□□ -0.1
CDC34P49427 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC34P49427 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.41□□□□□ -0.1
CDC34P49427 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 NKILA-202ENST00000614771 2598 ntBASIC14.41□□□□□ -0.1
CDC34P49427 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDC34P49427 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDC34P49427 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.41□□□□□ -0.1
CDC34P49427 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC34P49427 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC34P49427 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 AC092368.3-202ENST00000574180 1591 ntBASIC14.4□□□□□ -0.1
CDC34P49427 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CDC34P49427 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDC34P49427 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CDC34P49427 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.4□□□□□ -0.1
CDC34P49427 DUSP5P2-201ENST00000426873 1033 ntBASIC14.4□□□□□ -0.1
CDC34P49427 KRT18P5-201ENST00000436075 1291 ntBASIC14.4□□□□□ -0.1
CDC34P49427 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.4□□□□□ -0.1
CDC34P49427 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.4□□□□□ -0.1
CDC34P49427 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CDC34P49427 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 AC105036.2-201ENST00000569468 176 ntBASIC14.4□□□□□ -0.1
CDC34P49427 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC34P49427 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CDC34P49427 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 AC022211.2-201ENST00000585075 2527 ntBASIC14.4□□□□□ -0.1
CDC34P49427 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.4□□□□□ -0.1
CDC34P49427 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.4□□□□□ -0.1
CDC34P49427 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC34P49427 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDC34P49427 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDC34P49427 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms