Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SLC1A6P48664 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A6P48664 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 AC011506.1-201ENST00000474329 610 ntBASIC17.94■□□□□ 0.46
SLC1A6P48664 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC1A6P48664 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A6P48664 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC1A6P48664 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC1A6P48664 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC1A6P48664 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A6P48664 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A6P48664 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A6P48664 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A6P48664 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 AL355802.2-201ENST00000402069 882 ntBASIC17.93■□□□□ 0.46
SLC1A6P48664 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.93■□□□□ 0.46
SLC1A6P48664 RN7SL471P-201ENST00000580476 299 ntBASIC17.93■□□□□ 0.46
SLC1A6P48664 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC1A6P48664 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.93■□□□□ 0.46
SLC1A6P48664 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A6P48664 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A6P48664 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
SLC1A6P48664 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SLC1A6P48664 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A6P48664 AL163051.1-201ENST00000569214 1512 ntBASIC17.93■□□□□ 0.46
SLC1A6P48664 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A6P48664 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.92■□□□□ 0.46
SLC1A6P48664 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A6P48664 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A6P48664 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC1A6P48664 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 AC093010.1-201ENST00000473625 1624 ntBASIC17.92■□□□□ 0.46
SLC1A6P48664 AL353807.1-201ENST00000427475 662 ntBASIC17.92■□□□□ 0.46
SLC1A6P48664 MIR6786-201ENST00000616843 113 ntBASIC17.92■□□□□ 0.46
SLC1A6P48664 AC009102.3-201ENST00000623118 1491 ntBASIC17.92■□□□□ 0.46
SLC1A6P48664 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SLC1A6P48664 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SLC1A6P48664 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A6P48664 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A6P48664 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A6P48664 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A6P48664 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SLC1A6P48664 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC1A6P48664 B3GAT3P1-201ENST00000471720 806 ntBASIC17.91■□□□□ 0.46
SLC1A6P48664 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC1A6P48664 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A6P48664 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.91■□□□□ 0.46
SLC1A6P48664 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A6P48664 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms