Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.23■□□□□ 0.35
GABRA4P48169 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GABRA4P48169 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
GABRA4P48169 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.23■□□□□ 0.35
GABRA4P48169 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GABRA4P48169 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.23■□□□□ 0.35
GABRA4P48169 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GABRA4P48169 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
GABRA4P48169 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GABRA4P48169 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GABRA4P48169 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GABRA4P48169 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GABRA4P48169 AC093010.1-201ENST00000473625 1624 ntBASIC17.22■□□□□ 0.35
GABRA4P48169 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
GABRA4P48169 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GABRA4P48169 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
GABRA4P48169 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GABRA4P48169 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.22■□□□□ 0.35
GABRA4P48169 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.22■□□□□ 0.35
GABRA4P48169 AL121894.2-201ENST00000602977 491 ntBASIC17.22■□□□□ 0.35
GABRA4P48169 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GABRA4P48169 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GABRA4P48169 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.22■□□□□ 0.35
GABRA4P48169 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GABRA4P48169 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.22■□□□□ 0.35
GABRA4P48169 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GABRA4P48169 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
GABRA4P48169 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.21■□□□□ 0.35
GABRA4P48169 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
GABRA4P48169 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.21■□□□□ 0.35
GABRA4P48169 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.21■□□□□ 0.35
GABRA4P48169 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
GABRA4P48169 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
GABRA4P48169 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.21■□□□□ 0.35
GABRA4P48169 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.21■□□□□ 0.35
GABRA4P48169 VENTXP7-201ENST00000475503 772 ntBASIC17.21■□□□□ 0.35
GABRA4P48169 FOSL1P1-201ENST00000511041 816 ntBASIC17.21■□□□□ 0.35
GABRA4P48169 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.21■□□□□ 0.35
GABRA4P48169 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.21■□□□□ 0.35
GABRA4P48169 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.21■□□□□ 0.35
GABRA4P48169 AL732292.2-201ENST00000609649 430 ntBASIC17.21■□□□□ 0.35
GABRA4P48169 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GABRA4P48169 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.21■□□□□ 0.35
GABRA4P48169 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.21■□□□□ 0.35
GABRA4P48169 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GABRA4P48169 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.21■□□□□ 0.35
GABRA4P48169 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GABRA4P48169 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GABRA4P48169 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.21■□□□□ 0.34
GABRA4P48169 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.34
GABRA4P48169 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GABRA4P48169 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.2■□□□□ 0.34
GABRA4P48169 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.2■□□□□ 0.34
GABRA4P48169 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
GABRA4P48169 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.2■□□□□ 0.34
GABRA4P48169 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.2■□□□□ 0.34
GABRA4P48169 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.2■□□□□ 0.34
GABRA4P48169 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.2■□□□□ 0.34
GABRA4P48169 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
GABRA4P48169 BNIP3P18-201ENST00000593976 575 ntBASIC17.2■□□□□ 0.34
GABRA4P48169 AC099336.1-202ENST00000602961 463 ntBASIC17.2■□□□□ 0.34
GABRA4P48169 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.2■□□□□ 0.34
GABRA4P48169 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GABRA4P48169 AC087289.5-201ENST00000586076 3175 ntBASIC17.2■□□□□ 0.34
GABRA4P48169 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.2■□□□□ 0.34
GABRA4P48169 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.2■□□□□ 0.34
GABRA4P48169 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.2■□□□□ 0.34
GABRA4P48169 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
GABRA4P48169 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.2■□□□□ 0.34
GABRA4P48169 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GABRA4P48169 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms