Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.83■□□□□ 0.28
HTR3AP46098 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.83■□□□□ 0.28
HTR3AP46098 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.83■□□□□ 0.28
HTR3AP46098 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.83■□□□□ 0.28
HTR3AP46098 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.83■□□□□ 0.28
HTR3AP46098 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.83■□□□□ 0.28
HTR3AP46098 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.83■□□□□ 0.28
HTR3AP46098 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.83■□□□□ 0.28
HTR3AP46098 AC145285.6-201ENST00000604632 637 ntBASIC16.83■□□□□ 0.28
HTR3AP46098 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.83■□□□□ 0.28
HTR3AP46098 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.83■□□□□ 0.28
HTR3AP46098 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.83■□□□□ 0.28
HTR3AP46098 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HTR3AP46098 AC011270.2-201ENST00000624293 2550 ntBASIC16.83■□□□□ 0.28
HTR3AP46098 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.82■□□□□ 0.28
HTR3AP46098 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HTR3AP46098 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 AP000523.1-201ENST00000398242 1049 ntBASIC16.82■□□□□ 0.28
HTR3AP46098 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HTR3AP46098 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.82■□□□□ 0.28
HTR3AP46098 KRT18P23-201ENST00000435622 1283 ntBASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 ECEL1P2-202ENST00000465689 757 ntBASIC16.82■□□□□ 0.28
HTR3AP46098 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.82■□□□□ 0.28
HTR3AP46098 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
HTR3AP46098 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.82■□□□□ 0.28
HTR3AP46098 FAM87A-204ENST00000613235 858 ntBASIC16.82■□□□□ 0.28
HTR3AP46098 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HTR3AP46098 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HTR3AP46098 AC073912.3-201ENST00000624414 853 ntBASIC16.82■□□□□ 0.28
HTR3AP46098 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
HTR3AP46098 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
HTR3AP46098 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HTR3AP46098 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.82■□□□□ 0.28
HTR3AP46098 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
HTR3AP46098 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
HTR3AP46098 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HTR3AP46098 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
HTR3AP46098 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HTR3AP46098 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.81■□□□□ 0.28
HTR3AP46098 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.81■□□□□ 0.28
HTR3AP46098 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.81■□□□□ 0.28
HTR3AP46098 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 AL499627.1-201ENST00000569373 2188 ntBASIC16.81■□□□□ 0.28
HTR3AP46098 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HTR3AP46098 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 ABALON-201ENST00000629058 1903 ntBASIC16.81■□□□□ 0.28
HTR3AP46098 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTR3AP46098 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HTR3AP46098 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.81■□□□□ 0.28
HTR3AP46098 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.81■□□□□ 0.28
HTR3AP46098 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.81■□□□□ 0.28
HTR3AP46098 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.81■□□□□ 0.28
HTR3AP46098 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.81■□□□□ 0.28
HTR3AP46098 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.81■□□□□ 0.28
HTR3AP46098 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
HTR3AP46098 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms