Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.95■□□□□ 0.62
MMP13P45452 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
MMP13P45452 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.95■□□□□ 0.62
MMP13P45452 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.95■□□□□ 0.62
MMP13P45452 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.95■□□□□ 0.62
MMP13P45452 MYC-208ENST00000641036 567 ntBASIC18.95■□□□□ 0.62
MMP13P45452 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP13P45452 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.95■□□□□ 0.62
MMP13P45452 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP13P45452 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.95■□□□□ 0.62
MMP13P45452 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.95■□□□□ 0.62
MMP13P45452 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.95■□□□□ 0.62
MMP13P45452 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MMP13P45452 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP13P45452 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MMP13P45452 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
MMP13P45452 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
MMP13P45452 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP13P45452 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.94■□□□□ 0.62
MMP13P45452 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 AC113347.1-201ENST00000413321 391 ntBASIC18.94■□□□□ 0.62
MMP13P45452 ECEL1P3-201ENST00000427961 737 ntBASIC18.94■□□□□ 0.62
MMP13P45452 LIN28AP1-201ENST00000429574 405 ntBASIC18.94■□□□□ 0.62
MMP13P45452 AC009947.2-201ENST00000444014 672 ntBASIC18.94■□□□□ 0.62
MMP13P45452 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.94■□□□□ 0.62
MMP13P45452 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP13P45452 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
MMP13P45452 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.94■□□□□ 0.62
MMP13P45452 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
MMP13P45452 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.94■□□□□ 0.62
MMP13P45452 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MMP13P45452 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MMP13P45452 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP13P45452 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 AC112777.1-201ENST00000540175 1423 ntBASIC18.93■□□□□ 0.62
MMP13P45452 AC012317.2-201ENST00000623305 2251 ntBASIC18.93■□□□□ 0.62
MMP13P45452 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.93■□□□□ 0.62
MMP13P45452 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 KRT18P41-201ENST00000518924 1277 ntBASIC18.93■□□□□ 0.62
MMP13P45452 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.93■□□□□ 0.62
MMP13P45452 AC010203.1-204ENST00000548782 407 ntBASIC18.93■□□□□ 0.62
MMP13P45452 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.93■□□□□ 0.62
MMP13P45452 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.93■□□□□ 0.62
MMP13P45452 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP13P45452 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 PCDHA12-202ENST00000613593 2588 ntBASIC18.93■□□□□ 0.62
MMP13P45452 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP13P45452 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.93■□□□□ 0.62
MMP13P45452 AC138028.4-201ENST00000564984 1845 ntBASIC18.93■□□□□ 0.62
MMP13P45452 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MMP13P45452 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MMP13P45452 AL645608.8-201ENST00000606034 2086 ntBASIC18.93■□□□□ 0.62
MMP13P45452 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MMP13P45452 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
MMP13P45452 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MMP13P45452 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms