Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NKX2-1P43699 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NKX2-1P43699 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NKX2-1P43699 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-1P43699 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NKX2-1P43699 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-1P43699 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 AC097658.1-201ENST00000475555 843 ntBASIC14.93□□□□□ -0.02
NKX2-1P43699 KRT18P41-201ENST00000518924 1277 ntBASIC14.93□□□□□ -0.02
NKX2-1P43699 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.93□□□□□ -0.02
NKX2-1P43699 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-1P43699 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NKX2-1P43699 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-1P43699 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.93□□□□□ -0.02
NKX2-1P43699 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.93□□□□□ -0.02
NKX2-1P43699 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NKX2-1P43699 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.92□□□□□ -0.02
NKX2-1P43699 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
NKX2-1P43699 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NKX2-1P43699 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
NKX2-1P43699 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NKX2-1P43699 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX2-1P43699 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NKX2-1P43699 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX2-1P43699 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.92□□□□□ -0.02
NKX2-1P43699 Z85996.1-201ENST00000494644 937 ntBASIC14.92□□□□□ -0.02
NKX2-1P43699 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 NBPF21P-201ENST00000425093 1451 ntBASIC14.92□□□□□ -0.02
NKX2-1P43699 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 PHGDH-209ENST00000641074 1780 ntBASIC14.92□□□□□ -0.02
NKX2-1P43699 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.92□□□□□ -0.02
NKX2-1P43699 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NKX2-1P43699 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms