Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC1A3P43003 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A3P43003 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A3P43003 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 MIR149-201ENST00000384879 89 ntBASIC16.77■□□□□ 0.28
SLC1A3P43003 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A3P43003 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SLC1A3P43003 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A3P43003 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A3P43003 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC1A3P43003 NEK4P2-201ENST00000580004 1012 ntBASIC16.77■□□□□ 0.28
SLC1A3P43003 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC1A3P43003 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC1A3P43003 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.77■□□□□ 0.27
SLC1A3P43003 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SLC1A3P43003 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SLC1A3P43003 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SLC1A3P43003 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC1A3P43003 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 AC135776.1-201ENST00000319817 2481 ntBASIC16.76■□□□□ 0.27
SLC1A3P43003 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A3P43003 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 AC009102.3-201ENST00000623118 1491 ntBASIC16.76■□□□□ 0.27
SLC1A3P43003 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 AC009947.2-201ENST00000444014 672 ntBASIC16.76■□□□□ 0.27
SLC1A3P43003 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC1A3P43003 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.76■□□□□ 0.27
SLC1A3P43003 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A3P43003 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SLC1A3P43003 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC1A3P43003 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SLC1A3P43003 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SLC1A3P43003 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.76■□□□□ 0.27
SLC1A3P43003 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SLC1A3P43003 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SLC1A3P43003 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SLC1A3P43003 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.75■□□□□ 0.27
SLC1A3P43003 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SLC1A3P43003 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
SLC1A3P43003 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SLC1A3P43003 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms