Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 NUS1P1-201ENST00000446295 882 ntBASIC20.06■□□□□ 0.8
RFC5P40937 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC5P40937 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC5P40937 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.06■□□□□ 0.8
RFC5P40937 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 PRELID1P1-202ENST00000567272 903 ntBASIC20.06■□□□□ 0.8
RFC5P40937 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.06■□□□□ 0.8
RFC5P40937 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RFC5P40937 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.06■□□□□ 0.8
RFC5P40937 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC5P40937 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RFC5P40937 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.06■□□□□ 0.8
RFC5P40937 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFC5P40937 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.06■□□□□ 0.8
RFC5P40937 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RFC5P40937 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.05■□□□□ 0.8
RFC5P40937 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.05■□□□□ 0.8
RFC5P40937 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
RFC5P40937 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.05■□□□□ 0.8
RFC5P40937 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 AL845331.1-201ENST00000424978 1190 ntBASIC20.05■□□□□ 0.8
RFC5P40937 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 AC068472.1-201ENST00000474589 881 ntBASIC20.05■□□□□ 0.8
RFC5P40937 AC104819.1-201ENST00000504587 486 ntBASIC20.05■□□□□ 0.8
RFC5P40937 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 KRT126P-201ENST00000549467 1181 ntBASIC20.05■□□□□ 0.8
RFC5P40937 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RFC5P40937 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFC5P40937 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.05■□□□□ 0.8
RFC5P40937 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.04■□□□□ 0.8
RFC5P40937 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RFC5P40937 KRT17P6-201ENST00000453795 1220 ntBASIC20.04■□□□□ 0.8
RFC5P40937 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.04■□□□□ 0.8
RFC5P40937 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.04■□□□□ 0.8
RFC5P40937 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.04■□□□□ 0.8
RFC5P40937 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.04■□□□□ 0.8
RFC5P40937 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.04■□□□□ 0.8
RFC5P40937 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFC5P40937 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.03■□□□□ 0.8
RFC5P40937 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.03■□□□□ 0.8
RFC5P40937 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
RFC5P40937 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.03■□□□□ 0.8
RFC5P40937 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.03■□□□□ 0.8
RFC5P40937 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RFC5P40937 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms