Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
USP8P40818 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
USP8P40818 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.85■□□□□ 0.77
USP8P40818 KRT8P50-201ENST00000562022 1438 ntBASIC19.85■□□□□ 0.77
USP8P40818 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP8P40818 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
USP8P40818 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.84■□□□□ 0.77
USP8P40818 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
USP8P40818 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 KRT18P23-201ENST00000435622 1283 ntBASIC19.84■□□□□ 0.77
USP8P40818 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.84■□□□□ 0.77
USP8P40818 ECEL1P2-202ENST00000465689 757 ntBASIC19.84■□□□□ 0.77
USP8P40818 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.84■□□□□ 0.77
USP8P40818 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
USP8P40818 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.84■□□□□ 0.77
USP8P40818 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.84■□□□□ 0.77
USP8P40818 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP8P40818 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
USP8P40818 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
USP8P40818 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
USP8P40818 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP8P40818 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.83■□□□□ 0.77
USP8P40818 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
USP8P40818 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP8P40818 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.83■□□□□ 0.77
USP8P40818 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
USP8P40818 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP8P40818 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.83■□□□□ 0.77
USP8P40818 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP8P40818 AP000593.1-201ENST00000393668 712 ntBASIC19.83■□□□□ 0.77
USP8P40818 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.83■□□□□ 0.77
USP8P40818 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP8P40818 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.83■□□□□ 0.77
USP8P40818 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.83■□□□□ 0.77
USP8P40818 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.83■□□□□ 0.77
USP8P40818 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP8P40818 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.83■□□□□ 0.77
USP8P40818 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP8P40818 AC010653.2-201ENST00000623505 997 ntBASIC19.83■□□□□ 0.77
USP8P40818 AL354751.1-201ENST00000412768 1863 ntBASIC19.83■□□□□ 0.76
USP8P40818 AC135776.1-201ENST00000319817 2481 ntBASIC19.83■□□□□ 0.76
USP8P40818 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
USP8P40818 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
USP8P40818 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP8P40818 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
USP8P40818 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.83■□□□□ 0.76
USP8P40818 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.83■□□□□ 0.76
USP8P40818 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP8P40818 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP8P40818 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP8P40818 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.83■□□□□ 0.76
USP8P40818 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.83■□□□□ 0.76
USP8P40818 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP8P40818 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP8P40818 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP8P40818 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP8P40818 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP8P40818 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP8P40818 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP8P40818 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.82■□□□□ 0.76
USP8P40818 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
USP8P40818 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.82■□□□□ 0.76
USP8P40818 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.82■□□□□ 0.76
USP8P40818 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.82■□□□□ 0.76
USP8P40818 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.82■□□□□ 0.76
USP8P40818 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP8P40818 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms