Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.22■□□□□ 0.67
RFC1P35251 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC1P35251 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC1P35251 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RFC1P35251 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.22■□□□□ 0.67
RFC1P35251 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFC1P35251 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.22■□□□□ 0.67
RFC1P35251 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC1P35251 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RFC1P35251 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC1P35251 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC1P35251 AL096828.2-201ENST00000567259 1965 ntBASIC19.21■□□□□ 0.67
RFC1P35251 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RFC1P35251 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.21■□□□□ 0.67
RFC1P35251 AL137013.1-201ENST00000432946 1228 ntBASIC19.21■□□□□ 0.67
RFC1P35251 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.21■□□□□ 0.67
RFC1P35251 ATP5G1P1-201ENST00000448724 379 ntBASIC19.21■□□□□ 0.67
RFC1P35251 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC1P35251 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RFC1P35251 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC1P35251 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.21■□□□□ 0.67
RFC1P35251 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RFC1P35251 AL024508.2-201ENST00000607749 1894 ntBASIC19.21■□□□□ 0.67
RFC1P35251 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 AC092865.7-201ENST00000641832 219 ntBASIC19.21■□□□□ 0.67
RFC1P35251 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 AL133373.2-201ENST00000623187 2828 ntBASIC19.21■□□□□ 0.67
RFC1P35251 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RFC1P35251 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RFC1P35251 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC1P35251 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RFC1P35251 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC1P35251 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.2■□□□□ 0.66
RFC1P35251 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 AC005521.1-201ENST00000393351 872 ntBASIC19.2■□□□□ 0.66
RFC1P35251 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RFC1P35251 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.2■□□□□ 0.66
RFC1P35251 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC1P35251 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.2■□□□□ 0.66
RFC1P35251 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC1P35251 AL157888.1-201ENST00000631930 593 ntBASIC19.2■□□□□ 0.66
RFC1P35251 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFC1P35251 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC1P35251 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC1P35251 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC1P35251 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC1P35251 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFC1P35251 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.19■□□□□ 0.66
RFC1P35251 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFC1P35251 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.19■□□□□ 0.66
RFC1P35251 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC1P35251 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.19■□□□□ 0.66
RFC1P35251 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.19■□□□□ 0.66
RFC1P35251 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.19■□□□□ 0.66
RFC1P35251 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.19■□□□□ 0.66
RFC1P35251 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.19■□□□□ 0.66
RFC1P35251 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.19■□□□□ 0.66
RFC1P35251 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.19■□□□□ 0.66
RFC1P35251 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFC1P35251 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFC1P35251 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.19■□□□□ 0.66
RFC1P35251 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms