Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC6A4P31645 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC6A4P31645 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC6A4P31645 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
SLC6A4P31645 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC6A4P31645 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC6A4P31645 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 AC068472.1-201ENST00000474589 881 ntBASIC18.65■□□□□ 0.58
SLC6A4P31645 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC6A4P31645 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SLC6A4P31645 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 AC009113.1-201ENST00000570267 2443 ntBASIC18.65■□□□□ 0.58
SLC6A4P31645 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A4P31645 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A4P31645 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC6A4P31645 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC6A4P31645 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC6A4P31645 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC6A4P31645 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC6A4P31645 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
SLC6A4P31645 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC6A4P31645 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
SLC6A4P31645 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A4P31645 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A4P31645 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC6A4P31645 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC6A4P31645 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC6A4P31645 AC074051.2-201ENST00000565115 352 ntBASIC18.64■□□□□ 0.57
SLC6A4P31645 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC6A4P31645 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC6A4P31645 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A4P31645 AL353801.3-201ENST00000609898 542 ntBASIC18.64■□□□□ 0.57
SLC6A4P31645 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A4P31645 AC009154.2-201ENST00000621177 724 ntBASIC18.64■□□□□ 0.57
SLC6A4P31645 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC6A4P31645 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC6A4P31645 AC093677.2-201ENST00000600169 1863 ntBASIC18.64■□□□□ 0.57
SLC6A4P31645 AC135776.1-201ENST00000319817 2481 ntBASIC18.64■□□□□ 0.57
SLC6A4P31645 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC6A4P31645 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SLC6A4P31645 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A4P31645 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A4P31645 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A4P31645 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A4P31645 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC6A4P31645 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms