Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SAPCD2P3-201ENST00000455031 850 ntBASIC19.64■□□□□ 0.73
HOXA11P31270 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA11P31270 AP002469.2-201ENST00000531724 424 ntBASIC19.64■□□□□ 0.73
HOXA11P31270 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HOXA11P31270 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA11P31270 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA11P31270 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA11P31270 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA11P31270 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA11P31270 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HOXA11P31270 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
HOXA11P31270 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA11P31270 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXA11P31270 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HOXA11P31270 TNXA-203ENST00000507684 2038 ntBASIC19.64■□□□□ 0.73
HOXA11P31270 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXA11P31270 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
HOXA11P31270 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA11P31270 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HOXA11P31270 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXA11P31270 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HOXA11P31270 AC132008.2-207ENST00000454517 770 ntBASIC19.63■□□□□ 0.73
HOXA11P31270 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA11P31270 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HOXA11P31270 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.63■□□□□ 0.73
HOXA11P31270 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HOXA11P31270 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
HOXA11P31270 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXA11P31270 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXA11P31270 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HOXA11P31270 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXA11P31270 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXA11P31270 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 AC093010.1-201ENST00000473625 1624 ntBASIC19.62■□□□□ 0.73
HOXA11P31270 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXA11P31270 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXA11P31270 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXA11P31270 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HOXA11P31270 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
HOXA11P31270 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXA11P31270 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.62■□□□□ 0.73
HOXA11P31270 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXA11P31270 AC106795.1-205ENST00000512851 1056 ntBASIC19.62■□□□□ 0.73
HOXA11P31270 AC009533.2-201ENST00000543664 586 ntBASIC19.62■□□□□ 0.73
HOXA11P31270 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXA11P31270 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXA11P31270 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXA11P31270 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
HOXA11P31270 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXA11P31270 INTS4P1-201ENST00000438455 1935 ntBASIC19.61■□□□□ 0.73
HOXA11P31270 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HOXA11P31270 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.61■□□□□ 0.73
HOXA11P31270 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXA11P31270 AC011467.2-201ENST00000598425 242 ntBASIC19.61■□□□□ 0.73
HOXA11P31270 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.61■□□□□ 0.73
HOXA11P31270 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXA11P31270 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXA11P31270 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HOXA11P31270 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
HOXA11P31270 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXA11P31270 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXA11P31270 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.61■□□□□ 0.73
HOXA11P31270 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms