Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC092364.2-202ENST00000597012 1073 ntBASIC20.46■□□□□ 0.87
CTGFP29279 AL513190.1-201ENST00000621254 727 ntBASIC20.46■□□□□ 0.87
CTGFP29279 MIR1199-201ENST00000621445 119 ntBASIC20.46■□□□□ 0.87
CTGFP29279 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTGFP29279 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.46■□□□□ 0.87
CTGFP29279 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CTGFP29279 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CTGFP29279 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTGFP29279 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.46■□□□□ 0.87
CTGFP29279 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTGFP29279 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.45■□□□□ 0.86
CTGFP29279 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.45■□□□□ 0.86
CTGFP29279 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CTGFP29279 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 AC136632.2-201ENST00000512891 861 ntBASIC20.45■□□□□ 0.86
CTGFP29279 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.45■□□□□ 0.86
CTGFP29279 AC106028.4-201ENST00000614509 607 ntBASIC20.45■□□□□ 0.86
CTGFP29279 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.45■□□□□ 0.86
CTGFP29279 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.45■□□□□ 0.86
CTGFP29279 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.45■□□□□ 0.86
CTGFP29279 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.45■□□□□ 0.86
CTGFP29279 AL499627.1-201ENST00000569373 2188 ntBASIC20.45■□□□□ 0.86
CTGFP29279 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTGFP29279 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
CTGFP29279 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.44■□□□□ 0.86
CTGFP29279 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.44■□□□□ 0.86
CTGFP29279 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.44■□□□□ 0.86
CTGFP29279 AC006557.2-201ENST00000592985 1240 ntBASIC20.44■□□□□ 0.86
CTGFP29279 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.44■□□□□ 0.86
CTGFP29279 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CTGFP29279 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.44■□□□□ 0.86
CTGFP29279 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 AC002310.6-201ENST00000624451 1377 ntBASIC20.44■□□□□ 0.86
CTGFP29279 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTGFP29279 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 AL049812.1-201ENST00000432563 2267 ntBASIC20.43■□□□□ 0.86
CTGFP29279 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.43■□□□□ 0.86
CTGFP29279 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.43■□□□□ 0.86
CTGFP29279 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.43■□□□□ 0.86
CTGFP29279 AP002472.1-201ENST00000577490 586 ntBASIC20.43■□□□□ 0.86
CTGFP29279 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CTGFP29279 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.43■□□□□ 0.86
CTGFP29279 AC027612.4-201ENST00000605371 583 ntBASIC20.43■□□□□ 0.86
CTGFP29279 AL078644.1-201ENST00000609881 752 ntBASIC20.43■□□□□ 0.86
CTGFP29279 C20orf181-201ENST00000623918 480 ntBASIC20.43■□□□□ 0.86
CTGFP29279 PGM5P2-202ENST00000637225 1043 ntBASIC20.43■□□□□ 0.86
CTGFP29279 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CTGFP29279 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.43■□□□□ 0.86
CTGFP29279 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTGFP29279 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.42■□□□□ 0.86
CTGFP29279 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CTGFP29279 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTGFP29279 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms