Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.57■□□□□ 0.88
GCFC2P16383 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GCFC2P16383 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.57■□□□□ 0.88
GCFC2P16383 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.57■□□□□ 0.88
GCFC2P16383 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.57■□□□□ 0.88
GCFC2P16383 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.57■□□□□ 0.88
GCFC2P16383 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.57■□□□□ 0.88
GCFC2P16383 AC091076.1-201ENST00000610741 619 ntBASIC20.57■□□□□ 0.88
GCFC2P16383 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
GCFC2P16383 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.57■□□□□ 0.88
GCFC2P16383 IER3-202ENST00000376377 1350 ntBASIC20.57■□□□□ 0.88
GCFC2P16383 AL353692.3-201ENST00000407031 1396 ntBASIC20.57■□□□□ 0.88
GCFC2P16383 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.57■□□□□ 0.88
GCFC2P16383 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GCFC2P16383 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.57■□□□□ 0.88
GCFC2P16383 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
GCFC2P16383 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.56■□□□□ 0.88
GCFC2P16383 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
GCFC2P16383 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
GCFC2P16383 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.56■□□□□ 0.88
GCFC2P16383 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.56■□□□□ 0.88
GCFC2P16383 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.56■□□□□ 0.88
GCFC2P16383 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.56■□□□□ 0.88
GCFC2P16383 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
GCFC2P16383 AL358472.4-201ENST00000633140 710 ntBASIC20.56■□□□□ 0.88
GCFC2P16383 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.56■□□□□ 0.88
GCFC2P16383 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GCFC2P16383 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.55■□□□□ 0.88
GCFC2P16383 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GCFC2P16383 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GCFC2P16383 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
GCFC2P16383 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
GCFC2P16383 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
GCFC2P16383 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.55■□□□□ 0.88
GCFC2P16383 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 LINC00602-201ENST00000629776 2065 ntBASIC20.55■□□□□ 0.88
GCFC2P16383 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.55■□□□□ 0.88
GCFC2P16383 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.55■□□□□ 0.88
GCFC2P16383 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
GCFC2P16383 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.55■□□□□ 0.88
GCFC2P16383 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.55■□□□□ 0.88
GCFC2P16383 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 AL354751.1-201ENST00000412768 1863 ntBASIC20.55■□□□□ 0.88
GCFC2P16383 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GCFC2P16383 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
GCFC2P16383 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GCFC2P16383 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.54■□□□□ 0.88
GCFC2P16383 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.54■□□□□ 0.88
GCFC2P16383 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.54■□□□□ 0.88
GCFC2P16383 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GCFC2P16383 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms