Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXD8P13378 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXD8P13378 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HOXD8P13378 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
HOXD8P13378 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXD8P13378 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HOXD8P13378 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HOXD8P13378 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HOXD8P13378 AC096633.1-201ENST00000422446 749 ntBASIC20.02■□□□□ 0.8
HOXD8P13378 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HOXD8P13378 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HOXD8P13378 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXD8P13378 SART3-203ENST00000546611 1184 ntBASIC20.02■□□□□ 0.8
HOXD8P13378 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXD8P13378 AC021087.4-201ENST00000563761 564 ntBASIC20.02■□□□□ 0.8
HOXD8P13378 AC139887.3-201ENST00000568585 713 ntBASIC20.02■□□□□ 0.8
HOXD8P13378 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXD8P13378 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.02■□□□□ 0.8
HOXD8P13378 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXD8P13378 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.02■□□□□ 0.8
HOXD8P13378 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HOXD8P13378 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXD8P13378 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXD8P13378 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HOXD8P13378 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.02■□□□□ 0.8
HOXD8P13378 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HOXD8P13378 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.02■□□□□ 0.79
HOXD8P13378 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HOXD8P13378 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXD8P13378 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HOXD8P13378 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXD8P13378 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXD8P13378 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXD8P13378 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXD8P13378 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.01■□□□□ 0.79
HOXD8P13378 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.01■□□□□ 0.79
HOXD8P13378 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.01■□□□□ 0.79
HOXD8P13378 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
HOXD8P13378 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXD8P13378 AC006538.3-201ENST00000612495 578 ntBASIC20.01■□□□□ 0.79
HOXD8P13378 AP000867.4-201ENST00000641616 219 ntBASIC20.01■□□□□ 0.79
HOXD8P13378 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.01■□□□□ 0.79
HOXD8P13378 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 AC093010.1-201ENST00000473625 1624 ntBASIC20.01■□□□□ 0.79
HOXD8P13378 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HOXD8P13378 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HOXD8P13378 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXD8P13378 CROCCP3-202ENST00000420820 1947 ntBASIC20■□□□□ 0.79
HOXD8P13378 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXD8P13378 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20■□□□□ 0.79
HOXD8P13378 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20■□□□□ 0.79
HOXD8P13378 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXD8P13378 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
HOXD8P13378 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20■□□□□ 0.79
HOXD8P13378 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXD8P13378 AC093909.1-201ENST00000504731 1122 ntBASIC20■□□□□ 0.79
HOXD8P13378 AC106730.1-201ENST00000566722 1090 ntBASIC20■□□□□ 0.79
HOXD8P13378 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20■□□□□ 0.79
HOXD8P13378 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20■□□□□ 0.79
HOXD8P13378 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20■□□□□ 0.79
HOXD8P13378 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HOXD8P13378 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20■□□□□ 0.79
HOXD8P13378 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20■□□□□ 0.79
HOXD8P13378 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HOXD8P13378 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HOXD8P13378 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HOXD8P13378 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20■□□□□ 0.79
HOXD8P13378 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXD8P13378 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXD8P13378 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HOXD8P13378 FAM220CP-201ENST00000395253 831 ntBASIC19.99■□□□□ 0.79
HOXD8P13378 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXD8P13378 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HOXD8P13378 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXD8P13378 AC007967.3-201ENST00000434308 558 ntBASIC19.99■□□□□ 0.79
HOXD8P13378 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXD8P13378 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXD8P13378 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HOXD8P13378 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.99■□□□□ 0.79
HOXD8P13378 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.99■□□□□ 0.79
HOXD8P13378 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.99■□□□□ 0.79
HOXD8P13378 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXD8P13378 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
HOXD8P13378 AL139288.1-201ENST00000623748 933 ntBASIC19.99■□□□□ 0.79
HOXD8P13378 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.99■□□□□ 0.79
HOXD8P13378 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms