Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.02■□□□□ 0.32
TPRP12270 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TPRP12270 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.02■□□□□ 0.32
TPRP12270 CRYGEP-201ENST00000412192 528 ntBASIC17.02■□□□□ 0.32
TPRP12270 AC011467.2-201ENST00000598425 242 ntBASIC17.02■□□□□ 0.32
TPRP12270 AP000867.4-201ENST00000641616 219 ntBASIC17.02■□□□□ 0.32
TPRP12270 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.02■□□□□ 0.32
TPRP12270 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.02■□□□□ 0.32
TPRP12270 AC008556.1-201ENST00000610908 2040 ntBASIC17.02■□□□□ 0.32
TPRP12270 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.02■□□□□ 0.32
TPRP12270 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TPRP12270 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.02■□□□□ 0.32
TPRP12270 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.02■□□□□ 0.32
TPRP12270 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.02■□□□□ 0.32
TPRP12270 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPRP12270 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPRP12270 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TPRP12270 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPRP12270 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
TPRP12270 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
TPRP12270 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPRP12270 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TPRP12270 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
TPRP12270 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TPRP12270 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.02■□□□□ 0.31
TPRP12270 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPRP12270 AC007225.1-201ENST00000566331 1836 ntBASIC17.02■□□□□ 0.31
TPRP12270 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TPRP12270 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.01■□□□□ 0.31
TPRP12270 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.01■□□□□ 0.31
TPRP12270 AC108073.2-201ENST00000464002 357 ntBASIC17.01■□□□□ 0.31
TPRP12270 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TPRP12270 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.01■□□□□ 0.31
TPRP12270 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.01■□□□□ 0.31
TPRP12270 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
TPRP12270 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPRP12270 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.01■□□□□ 0.31
TPRP12270 RN7SL692P-201ENST00000464677 288 ntBASIC17.01■□□□□ 0.31
TPRP12270 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.01■□□□□ 0.31
TPRP12270 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.01■□□□□ 0.31
TPRP12270 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.01■□□□□ 0.31
TPRP12270 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.01■□□□□ 0.31
TPRP12270 PGM5P2-202ENST00000637225 1043 ntBASIC17.01■□□□□ 0.31
TPRP12270 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17■□□□□ 0.31
TPRP12270 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17■□□□□ 0.31
TPRP12270 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17■□□□□ 0.31
TPRP12270 ACA64.2-201ENST00000459014 129 ntBASIC17■□□□□ 0.31
TPRP12270 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17■□□□□ 0.31
TPRP12270 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17■□□□□ 0.31
TPRP12270 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17■□□□□ 0.31
TPRP12270 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17■□□□□ 0.31
TPRP12270 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17■□□□□ 0.31
TPRP12270 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 AC073621.1-201ENST00000392730 636 ntBASIC17■□□□□ 0.31
TPRP12270 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17■□□□□ 0.31
TPRP12270 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17■□□□□ 0.31
TPRP12270 FAM58CP-201ENST00000435741 640 ntBASIC17■□□□□ 0.31
TPRP12270 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17■□□□□ 0.31
TPRP12270 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17■□□□□ 0.31
TPRP12270 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17■□□□□ 0.31
TPRP12270 GPR53P-205ENST00000457298 1084 ntBASIC17■□□□□ 0.31
TPRP12270 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17■□□□□ 0.31
TPRP12270 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TPRP12270 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17■□□□□ 0.31
TPRP12270 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17■□□□□ 0.31
TPRP12270 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.99■□□□□ 0.31
TPRP12270 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 AL137060.1-201ENST00000618151 2648 ntBASIC16.99■□□□□ 0.31
TPRP12270 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TPRP12270 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms