Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
KRT3P12035 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
KRT3P12035 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KRT3P12035 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
KRT3P12035 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
KRT3P12035 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT3P12035 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
KRT3P12035 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT3P12035 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.21■□□□□ 0.67
KRT3P12035 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.21■□□□□ 0.67
KRT3P12035 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
KRT3P12035 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
KRT3P12035 AL024508.2-201ENST00000607749 1894 ntBASIC19.21■□□□□ 0.67
KRT3P12035 AC073508.3-201ENST00000619697 1419 ntBASIC19.21■□□□□ 0.67
KRT3P12035 AL157888.1-201ENST00000631930 593 ntBASIC19.21■□□□□ 0.67
KRT3P12035 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
KRT3P12035 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
KRT3P12035 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.21■□□□□ 0.67
KRT3P12035 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT3P12035 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT3P12035 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.21■□□□□ 0.67
KRT3P12035 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
KRT3P12035 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.21■□□□□ 0.66
KRT3P12035 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.2■□□□□ 0.66
KRT3P12035 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 AC005521.1-201ENST00000393351 872 ntBASIC19.2■□□□□ 0.66
KRT3P12035 BX664615.1-201ENST00000443558 458 ntBASIC19.2■□□□□ 0.66
KRT3P12035 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
KRT3P12035 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.2■□□□□ 0.66
KRT3P12035 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT3P12035 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT3P12035 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.2■□□□□ 0.66
KRT3P12035 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KRT3P12035 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KRT3P12035 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
KRT3P12035 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
KRT3P12035 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.2■□□□□ 0.66
KRT3P12035 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
KRT3P12035 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.19■□□□□ 0.66
KRT3P12035 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.19■□□□□ 0.66
KRT3P12035 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KRT3P12035 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.19■□□□□ 0.66
KRT3P12035 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.19■□□□□ 0.66
KRT3P12035 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.19■□□□□ 0.66
KRT3P12035 AC034232.1-201ENST00000506026 1064 ntBASIC19.19■□□□□ 0.66
KRT3P12035 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
KRT3P12035 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
KRT3P12035 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
KRT3P12035 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.18■□□□□ 0.66
KRT3P12035 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
KRT3P12035 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT3P12035 AC138028.4-201ENST00000564984 1845 ntBASIC19.18■□□□□ 0.66
KRT3P12035 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
KRT3P12035 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT3P12035 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
KRT3P12035 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms