Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.1■□□□□ 0.81
TPM1P09493 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.1■□□□□ 0.81
TPM1P09493 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM1P09493 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.1■□□□□ 0.81
TPM1P09493 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM1P09493 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
TPM1P09493 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.1■□□□□ 0.81
TPM1P09493 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.1■□□□□ 0.81
TPM1P09493 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
TPM1P09493 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.1■□□□□ 0.81
TPM1P09493 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.1■□□□□ 0.81
TPM1P09493 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 AC110285.5-201ENST00000611501 352 ntBASIC20.1■□□□□ 0.81
TPM1P09493 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TPM1P09493 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPM1P09493 AC012317.2-201ENST00000623305 2251 ntBASIC20.1■□□□□ 0.81
TPM1P09493 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TPM1P09493 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TPM1P09493 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TPM1P09493 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.09■□□□□ 0.81
TPM1P09493 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TPM1P09493 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.09■□□□□ 0.81
TPM1P09493 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TPM1P09493 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM1P09493 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM1P09493 RNA5SP413-201ENST00000516373 109 ntBASIC20.09■□□□□ 0.81
TPM1P09493 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 AC233263.1-201ENST00000578059 224 ntBASIC20.09■□□□□ 0.81
TPM1P09493 AC011298.2-201ENST00000617989 482 ntBASIC20.09■□□□□ 0.81
TPM1P09493 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.09■□□□□ 0.81
TPM1P09493 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPM1P09493 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.09■□□□□ 0.81
TPM1P09493 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TPM1P09493 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.08■□□□□ 0.81
TPM1P09493 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TPM1P09493 AL096828.2-201ENST00000567259 1965 ntBASIC20.08■□□□□ 0.81
TPM1P09493 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM1P09493 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
TPM1P09493 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.08■□□□□ 0.81
TPM1P09493 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TPM1P09493 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPM1P09493 AL353708.3-201ENST00000610272 989 ntBASIC20.08■□□□□ 0.81
TPM1P09493 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.08■□□□□ 0.81
TPM1P09493 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TPM1P09493 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TPM1P09493 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.08■□□□□ 0.8
TPM1P09493 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPM1P09493 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.07■□□□□ 0.8
TPM1P09493 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TPM1P09493 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TPM1P09493 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 AL353807.1-201ENST00000427475 662 ntBASIC20.07■□□□□ 0.8
TPM1P09493 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TPM1P09493 FAM207BP-201ENST00000447172 505 ntBASIC20.07■□□□□ 0.8
TPM1P09493 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms