Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.78■□□□□ 0.28
THBS1P07996 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.78■□□□□ 0.28
THBS1P07996 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.78■□□□□ 0.28
THBS1P07996 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.78■□□□□ 0.28
THBS1P07996 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 RN7SL850P-201ENST00000579959 291 ntBASIC16.78■□□□□ 0.28
THBS1P07996 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.78■□□□□ 0.28
THBS1P07996 AC024243.1-201ENST00000609234 778 ntBASIC16.78■□□□□ 0.28
THBS1P07996 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
THBS1P07996 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.78■□□□□ 0.28
THBS1P07996 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
THBS1P07996 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
THBS1P07996 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.78■□□□□ 0.28
THBS1P07996 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.78■□□□□ 0.28
THBS1P07996 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
THBS1P07996 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
THBS1P07996 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.77■□□□□ 0.28
THBS1P07996 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THBS1P07996 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.77■□□□□ 0.28
THBS1P07996 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.77■□□□□ 0.28
THBS1P07996 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THBS1P07996 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
THBS1P07996 TMPOP1-202ENST00000424642 1267 ntBASIC16.77■□□□□ 0.28
THBS1P07996 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.77■□□□□ 0.28
THBS1P07996 MIR3917-201ENST00000580971 93 ntBASIC16.77■□□□□ 0.28
THBS1P07996 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
THBS1P07996 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.77■□□□□ 0.28
THBS1P07996 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
THBS1P07996 AC067852.2-201ENST00000590513 2313 ntBASIC16.77■□□□□ 0.28
THBS1P07996 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
THBS1P07996 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.77■□□□□ 0.28
THBS1P07996 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.77■□□□□ 0.28
THBS1P07996 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.77■□□□□ 0.27
THBS1P07996 AP000997.3-201ENST00000623333 2250 ntBASIC16.77■□□□□ 0.27
THBS1P07996 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THBS1P07996 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.77■□□□□ 0.27
THBS1P07996 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
THBS1P07996 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
THBS1P07996 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
THBS1P07996 PCDHB18P-201ENST00000524813 2368 ntBASIC16.77■□□□□ 0.27
THBS1P07996 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
THBS1P07996 LINC01568-207ENST00000641790 1380 ntBASIC16.77■□□□□ 0.27
THBS1P07996 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 KRT18P55-202ENST00000578578 1546 ntBASIC16.76■□□□□ 0.27
THBS1P07996 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 AC026471.1-201ENST00000564629 3026 ntBASIC16.76■□□□□ 0.27
THBS1P07996 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
THBS1P07996 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.76■□□□□ 0.27
THBS1P07996 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
THBS1P07996 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
THBS1P07996 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.76■□□□□ 0.27
THBS1P07996 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.76■□□□□ 0.27
THBS1P07996 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.76■□□□□ 0.27
THBS1P07996 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.76■□□□□ 0.27
THBS1P07996 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.76■□□□□ 0.27
THBS1P07996 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.76■□□□□ 0.27
THBS1P07996 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
THBS1P07996 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
THBS1P07996 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.76■□□□□ 0.27
THBS1P07996 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
THBS1P07996 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THBS1P07996 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms