Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.95■□□□□ 0.46
CAPN1P07384 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CAPN1P07384 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.95■□□□□ 0.46
CAPN1P07384 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CAPN1P07384 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.95■□□□□ 0.46
CAPN1P07384 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.95■□□□□ 0.46
CAPN1P07384 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN1P07384 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN1P07384 AL031133.1-201ENST00000406807 723 ntBASIC17.94■□□□□ 0.46
CAPN1P07384 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.94■□□□□ 0.46
CAPN1P07384 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 LINC01238-205ENST00000567549 1107 ntBASIC17.94■□□□□ 0.46
CAPN1P07384 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CAPN1P07384 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN1P07384 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN1P07384 AC093677.2-201ENST00000600169 1863 ntBASIC17.94■□□□□ 0.46
CAPN1P07384 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.94■□□□□ 0.46
CAPN1P07384 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CAPN1P07384 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CAPN1P07384 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CAPN1P07384 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 HTR7P1-202ENST00000624664 4411 ntBASIC17.93■□□□□ 0.46
CAPN1P07384 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 ESPNP-201ENST00000270691 2015 ntBASIC17.93■□□□□ 0.46
CAPN1P07384 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CAPN1P07384 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.93■□□□□ 0.46
CAPN1P07384 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.93■□□□□ 0.46
CAPN1P07384 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 AL441883.1-201ENST00000566170 1045 ntBASIC17.93■□□□□ 0.46
CAPN1P07384 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.93■□□□□ 0.46
CAPN1P07384 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CAPN1P07384 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CAPN1P07384 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.93■□□□□ 0.46
CAPN1P07384 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CAPN1P07384 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.92■□□□□ 0.46
CAPN1P07384 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CAPN1P07384 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.92■□□□□ 0.46
CAPN1P07384 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.92■□□□□ 0.46
CAPN1P07384 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.92■□□□□ 0.46
CAPN1P07384 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.92■□□□□ 0.46
CAPN1P07384 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.92■□□□□ 0.46
CAPN1P07384 MIR4674-201ENST00000582457 87 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms