Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
POLR3DP05423 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
POLR3DP05423 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 SDHAP2-201ENST00000455183 2001 ntBASIC21.75■■□□□ 1.07
POLR3DP05423 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR3DP05423 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 ANO7L1-203ENST00000602586 1720 ntBASIC21.75■■□□□ 1.07
POLR3DP05423 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
POLR3DP05423 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR3DP05423 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR3DP05423 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.75■■□□□ 1.07
POLR3DP05423 AP000867.3-201ENST00000524675 377 ntBASIC21.75■■□□□ 1.07
POLR3DP05423 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR3DP05423 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.75■■□□□ 1.07
POLR3DP05423 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
POLR3DP05423 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR3DP05423 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR3DP05423 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.75■■□□□ 1.07
POLR3DP05423 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
POLR3DP05423 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
POLR3DP05423 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
POLR3DP05423 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.75■■□□□ 1.07
POLR3DP05423 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
POLR3DP05423 AC005082.1-201ENST00000413042 2259 ntBASIC21.75■■□□□ 1.07
POLR3DP05423 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
POLR3DP05423 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
POLR3DP05423 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR3DP05423 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
POLR3DP05423 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.74■■□□□ 1.07
POLR3DP05423 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.74■■□□□ 1.07
POLR3DP05423 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.74■■□□□ 1.07
POLR3DP05423 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR3DP05423 TOB2P1-201ENST00000469761 992 ntBASIC21.74■■□□□ 1.07
POLR3DP05423 GUSBP12-201ENST00000513727 720 ntBASIC21.74■■□□□ 1.07
POLR3DP05423 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.74■■□□□ 1.07
POLR3DP05423 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.74■■□□□ 1.07
POLR3DP05423 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.74■■□□□ 1.07
POLR3DP05423 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR3DP05423 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR3DP05423 AC124864.1-201ENST00000623408 392 ntBASIC21.74■■□□□ 1.07
POLR3DP05423 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
POLR3DP05423 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.74■■□□□ 1.07
POLR3DP05423 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
POLR3DP05423 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.74■■□□□ 1.07
POLR3DP05423 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
POLR3DP05423 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
POLR3DP05423 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.73■■□□□ 1.07
POLR3DP05423 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
POLR3DP05423 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.73■■□□□ 1.07
POLR3DP05423 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
POLR3DP05423 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.73■■□□□ 1.07
POLR3DP05423 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.73■■□□□ 1.07
POLR3DP05423 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
POLR3DP05423 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.73■■□□□ 1.07
POLR3DP05423 AL121894.2-201ENST00000602977 491 ntBASIC21.73■■□□□ 1.07
POLR3DP05423 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
POLR3DP05423 AC004263.2-201ENST00000617183 678 ntBASIC21.73■■□□□ 1.07
POLR3DP05423 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.73■■□□□ 1.07
POLR3DP05423 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.73■■□□□ 1.07
POLR3DP05423 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.73■■□□□ 1.07
POLR3DP05423 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
POLR3DP05423 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms