Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 GPAT2P1-201ENST00000444924 1672 ntBASIC16.53■□□□□ 0.24
HMGN1P05114 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.53■□□□□ 0.24
HMGN1P05114 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMGN1P05114 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.53■□□□□ 0.24
HMGN1P05114 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 MIR149-201ENST00000384879 89 ntBASIC16.53■□□□□ 0.24
HMGN1P05114 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGN1P05114 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.53■□□□□ 0.24
HMGN1P05114 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.53■□□□□ 0.24
HMGN1P05114 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGN1P05114 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.53■□□□□ 0.24
HMGN1P05114 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.53■□□□□ 0.24
HMGN1P05114 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HMGN1P05114 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMGN1P05114 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
HMGN1P05114 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
HMGN1P05114 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HMGN1P05114 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
HMGN1P05114 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HMGN1P05114 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGN1P05114 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HMGN1P05114 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
HMGN1P05114 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGN1P05114 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.52■□□□□ 0.24
HMGN1P05114 AC092666.2-201ENST00000613287 246 ntBASIC16.52■□□□□ 0.24
HMGN1P05114 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HMGN1P05114 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.52■□□□□ 0.24
HMGN1P05114 AC009102.3-201ENST00000623118 1491 ntBASIC16.52■□□□□ 0.23
HMGN1P05114 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGN1P05114 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMGN1P05114 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
HMGN1P05114 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGN1P05114 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HMGN1P05114 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGN1P05114 AC012317.2-201ENST00000623305 2251 ntBASIC16.52■□□□□ 0.23
HMGN1P05114 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
HMGN1P05114 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGN1P05114 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.52■□□□□ 0.23
HMGN1P05114 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HMGN1P05114 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGN1P05114 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGN1P05114 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HMGN1P05114 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 AL163051.1-201ENST00000569214 1512 ntBASIC16.51■□□□□ 0.23
HMGN1P05114 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGN1P05114 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGN1P05114 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 OR6D1P-203ENST00000641209 4860 ntBASIC16.51■□□□□ 0.23
HMGN1P05114 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HMGN1P05114 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
HMGN1P05114 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HMGN1P05114 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGN1P05114 KRT18P6-201ENST00000555540 1265 ntBASIC16.51■□□□□ 0.23
HMGN1P05114 MIR3180-5-201ENST00000583743 153 ntBASIC16.51■□□□□ 0.23
HMGN1P05114 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGN1P05114 AC006058.3-201ENST00000606217 1069 ntBASIC16.51■□□□□ 0.23
HMGN1P05114 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HMGN1P05114 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
HMGN1P05114 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGN1P05114 AC096733.2-201ENST00000609937 1394 ntBASIC16.51■□□□□ 0.23
HMGN1P05114 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 KRT18P55-202ENST00000578578 1546 ntBASIC16.5■□□□□ 0.23
HMGN1P05114 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGN1P05114 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGN1P05114 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGN1P05114 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms