Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TCRAP04437 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRAP04437 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.89□□□□□ -0.19
TCRAP04437 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.89□□□□□ -0.19
TCRAP04437 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRAP04437 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.89□□□□□ -0.19
TCRAP04437 UNC93B5-201ENST00000530315 699 ntBASIC13.89□□□□□ -0.19
TCRAP04437 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.89□□□□□ -0.19
TCRAP04437 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.89□□□□□ -0.19
TCRAP04437 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TCRAP04437 CKBP1-201ENST00000565489 1086 ntBASIC13.89□□□□□ -0.19
TCRAP04437 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.89□□□□□ -0.19
TCRAP04437 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TCRAP04437 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRAP04437 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.89□□□□□ -0.19
TCRAP04437 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.89□□□□□ -0.19
TCRAP04437 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 KRT18P55-202ENST00000578578 1546 ntBASIC13.89□□□□□ -0.19
TCRAP04437 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TCRAP04437 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 AC106820.2-201ENST00000563775 3264 ntBASIC13.89□□□□□ -0.19
TCRAP04437 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TCRAP04437 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TCRAP04437 OR6D1P-203ENST00000641209 4860 ntBASIC13.89□□□□□ -0.19
TCRAP04437 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TCRAP04437 MIR564-202ENST00000385049 94 ntBASIC13.88□□□□□ -0.19
TCRAP04437 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRAP04437 AC004951.3-201ENST00000418645 1148 ntBASIC13.88□□□□□ -0.19
TCRAP04437 PARL-206ENST00000435888 1098 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 AC069152.1-201ENST00000438030 544 ntBASIC13.88□□□□□ -0.19
TCRAP04437 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.88□□□□□ -0.19
TCRAP04437 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TCRAP04437 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TCRAP04437 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TCRAP04437 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.88□□□□□ -0.19
TCRAP04437 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TCRAP04437 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TCRAP04437 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TCRAP04437 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms