Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-ND3P03897 MYLKP1-201ENST00000509077 1580 ntBASIC18.59■□□□□ 0.57
MT-ND3P03897 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-ND3P03897 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
MT-ND3P03897 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-ND3P03897 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
MT-ND3P03897 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
MT-ND3P03897 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.59■□□□□ 0.57
MT-ND3P03897 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.59■□□□□ 0.57
MT-ND3P03897 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.59■□□□□ 0.57
MT-ND3P03897 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.59■□□□□ 0.57
MT-ND3P03897 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.59■□□□□ 0.57
MT-ND3P03897 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-ND3P03897 MIR6786-201ENST00000616843 113 ntBASIC18.59■□□□□ 0.57
MT-ND3P03897 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
MT-ND3P03897 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
MT-ND3P03897 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
MT-ND3P03897 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
MT-ND3P03897 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.59■□□□□ 0.57
MT-ND3P03897 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MT-ND3P03897 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
MT-ND3P03897 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
MT-ND3P03897 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.58■□□□□ 0.57
MT-ND3P03897 LINC01568-207ENST00000641790 1380 ntBASIC18.58■□□□□ 0.57
MT-ND3P03897 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
MT-ND3P03897 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.58■□□□□ 0.57
MT-ND3P03897 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
MT-ND3P03897 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
MT-ND3P03897 KRT18P22-201ENST00000402024 1347 ntBASIC18.58■□□□□ 0.57
MT-ND3P03897 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MT-ND3P03897 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
MT-ND3P03897 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.58■□□□□ 0.56
MT-ND3P03897 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 TMPOP1-202ENST00000424642 1267 ntBASIC18.58■□□□□ 0.56
MT-ND3P03897 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 AC131212.4-201ENST00000623606 975 ntBASIC18.58■□□□□ 0.56
MT-ND3P03897 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.58■□□□□ 0.56
MT-ND3P03897 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MT-ND3P03897 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
MT-ND3P03897 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 RCC2P3-201ENST00000418112 1537 ntBASIC18.58■□□□□ 0.56
MT-ND3P03897 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.58■□□□□ 0.56
MT-ND3P03897 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.58■□□□□ 0.56
MT-ND3P03897 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MT-ND3P03897 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.58■□□□□ 0.56
MT-ND3P03897 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.57■□□□□ 0.56
MT-ND3P03897 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.57■□□□□ 0.56
MT-ND3P03897 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.57■□□□□ 0.56
MT-ND3P03897 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.57■□□□□ 0.56
MT-ND3P03897 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.57■□□□□ 0.56
MT-ND3P03897 DGCR10-201ENST00000609839 495 ntBASIC18.57■□□□□ 0.56
MT-ND3P03897 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.57■□□□□ 0.56
MT-ND3P03897 AC092865.7-201ENST00000641832 219 ntBASIC18.57■□□□□ 0.56
MT-ND3P03897 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MT-ND3P03897 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.57■□□□□ 0.56
MT-ND3P03897 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MT-ND3P03897 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.56■□□□□ 0.56
MT-ND3P03897 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.56■□□□□ 0.56
MT-ND3P03897 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.56■□□□□ 0.56
MT-ND3P03897 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms