Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
ZBED1O96006 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZBED1O96006 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.26■□□□□ 0.67
ZBED1O96006 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZBED1O96006 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.26■□□□□ 0.67
ZBED1O96006 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.26■□□□□ 0.67
ZBED1O96006 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ZBED1O96006 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.26■□□□□ 0.67
ZBED1O96006 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZBED1O96006 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.26■□□□□ 0.67
ZBED1O96006 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZBED1O96006 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ZBED1O96006 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZBED1O96006 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZBED1O96006 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZBED1O96006 AC005332.1-201ENST00000577698 1310 ntBASIC19.25■□□□□ 0.67
ZBED1O96006 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
ZBED1O96006 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 AC135050.7-201ENST00000624508 2218 ntBASIC19.25■□□□□ 0.67
ZBED1O96006 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 MIR662-201ENST00000384847 95 ntBASIC19.25■□□□□ 0.67
ZBED1O96006 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZBED1O96006 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.25■□□□□ 0.67
ZBED1O96006 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.25■□□□□ 0.67
ZBED1O96006 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.25■□□□□ 0.67
ZBED1O96006 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZBED1O96006 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.25■□□□□ 0.67
ZBED1O96006 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZBED1O96006 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZBED1O96006 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.24■□□□□ 0.67
ZBED1O96006 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
ZBED1O96006 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.24■□□□□ 0.67
ZBED1O96006 PCED1CP-201ENST00000419887 785 ntBASIC19.24■□□□□ 0.67
ZBED1O96006 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZBED1O96006 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.24■□□□□ 0.67
ZBED1O96006 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ZBED1O96006 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.24■□□□□ 0.67
ZBED1O96006 AL358472.4-201ENST00000633140 710 ntBASIC19.24■□□□□ 0.67
ZBED1O96006 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
ZBED1O96006 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.24■□□□□ 0.67
ZBED1O96006 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZBED1O96006 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZBED1O96006 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.24■□□□□ 0.67
ZBED1O96006 AC007613.1-201ENST00000572811 2597 ntBASIC19.24■□□□□ 0.67
ZBED1O96006 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZBED1O96006 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZBED1O96006 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZBED1O96006 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZBED1O96006 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZBED1O96006 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.23■□□□□ 0.67
ZBED1O96006 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.23■□□□□ 0.67
ZBED1O96006 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
ZBED1O96006 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.23■□□□□ 0.67
ZBED1O96006 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZBED1O96006 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZBED1O96006 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZBED1O96006 AL645929.1-201ENST00000420084 975 ntBASIC19.23■□□□□ 0.67
ZBED1O96006 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.23■□□□□ 0.67
ZBED1O96006 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.23■□□□□ 0.67
ZBED1O96006 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.23■□□□□ 0.67
ZBED1O96006 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.23■□□□□ 0.67
ZBED1O96006 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.23■□□□□ 0.67
ZBED1O96006 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZBED1O96006 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.23■□□□□ 0.67
ZBED1O96006 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZBED1O96006 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
ZBED1O96006 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms