Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ABCA1O95477 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ABCA1O95477 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ABCA1O95477 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 AC018712.1-201ENST00000455767 687 ntBASIC15.26■□□□□ 0.03
ABCA1O95477 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.26■□□□□ 0.03
ABCA1O95477 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ABCA1O95477 AC104390.1-201ENST00000555663 520 ntBASIC15.26■□□□□ 0.03
ABCA1O95477 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ABCA1O95477 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.26■□□□□ 0.03
ABCA1O95477 BNIP3P18-201ENST00000593976 575 ntBASIC15.26■□□□□ 0.03
ABCA1O95477 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.26■□□□□ 0.03
ABCA1O95477 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ABCA1O95477 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.26■□□□□ 0.03
ABCA1O95477 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.25■□□□□ 0.03
ABCA1O95477 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 AC099343.3-201ENST00000605834 2503 ntBASIC15.25■□□□□ 0.03
ABCA1O95477 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.25■□□□□ 0.03
ABCA1O95477 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.25■□□□□ 0.03
ABCA1O95477 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
ABCA1O95477 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 AF186996.4-201ENST00000467186 377 ntBASIC15.25■□□□□ 0.03
ABCA1O95477 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.25■□□□□ 0.03
ABCA1O95477 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.25■□□□□ 0.03
ABCA1O95477 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.25■□□□□ 0.03
ABCA1O95477 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.25■□□□□ 0.03
ABCA1O95477 AC124864.1-201ENST00000623408 392 ntBASIC15.25■□□□□ 0.03
ABCA1O95477 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
ABCA1O95477 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.25■□□□□ 0.03
ABCA1O95477 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.25■□□□□ 0.03
ABCA1O95477 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ABCA1O95477 AC034236.2-201ENST00000606662 1610 ntBASIC15.25■□□□□ 0.03
ABCA1O95477 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCA1O95477 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCA1O95477 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCA1O95477 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.24■□□□□ 0.03
ABCA1O95477 TERC-201ENST00000602385 541 ntBASIC15.24■□□□□ 0.03
ABCA1O95477 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ABCA1O95477 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.24■□□□□ 0.03
ABCA1O95477 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.24■□□□□ 0.03
ABCA1O95477 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCA1O95477 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCA1O95477 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ABCA1O95477 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ABCA1O95477 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.24■□□□□ 0.03
ABCA1O95477 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCA1O95477 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCA1O95477 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.24■□□□□ 0.03
ABCA1O95477 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ABCA1O95477 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.24■□□□□ 0.03
ABCA1O95477 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms